Insertion junction: CLIP2.009098_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009098
Chromosome:chromosome 16
Location:1430553
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g652400 FAL18,FAP183 (1 of 17) PF13202 - EF hand (EF-hand_5); EF-hand domain Flagellar Associated Protein 183 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTACACATGCAACAGCCGCAGCAGCATTGAGCAGCAACAGACGCCGGCC
Internal bar code:CATCGCCGCTATTTGTGTATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:957
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTCTTCACCCTTCCTCC
Suggested primer 2:GCTCTCCAAGAAGCTGCTCA