Insertion junction: CLIP2.009106_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009106
Chromosome:chromosome 12
Location:6587169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538550 (1 of 21) IPR000679 - Zinc finger, GATA-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTAGATTGCAGTTCCTCCGCGCAAACCGCGGCTAGCGCCTCCAGAGCGC
Internal bar code:TATGTGTACGTAATTACTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1764
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGAGACCTAGCCCAGAG
Suggested primer 2:CTGCTGAGGTTGGTGCTGTA