Insertion junction: CLIP2.009109_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009109
Chromosome:chromosome 17
Location:5684276
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740350 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCGCGCAGATGCACGCCGGCGCAAACTCCGAGCGCATGGCCGAGAGC
Internal bar code:TTATTACTAGAAGCTGCTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1364
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCCTCAGAGATACTGGC
Suggested primer 2:GATAGTTCGATGCCTGCGGA