Insertion junction: CLIP2.009111_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009111
Chromosome:chromosome 10
Location:4045732
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g447700 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTCCTTTGCTCCCACTAGGAGCAGAACATCACGGACGCGAATGTGAG
Internal bar code:CTAGGGTTATTATTAGCGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1679
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGTGTGTTTGCGATGTT
Suggested primer 2:GTGAACGTCCGTGCTTTCAC