Insertion junction: CLIP2.009112_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009112
Chromosome:chromosome 1
Location:7160550
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g051300 (1 of 8) PTHR11339//PTHR11339:SF290 - EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED // PROTEIN T26A8.1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATCGACCCACCCACAAACGCCCCACACACTGTCCGCCCGCACCTCGC
Internal bar code:AAGACGCTAGTCACGTAAAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4100
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCGTATGTCAGTGTCCAA
Suggested primer 2:CGAGCTTCTACATGCAACGC