Insertion junction: CLIP2.009119_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009119
Chromosome:chromosome 6
Location:4839315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280250 (1 of 1) PTHR31018:SF3 - CELL WALL MANNOPROTEIN PST1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTATGCAAGTGAGCGTGCATGTAGCAAGCTGTTCCGTGTCTGCCTCTCA
Internal bar code:CACGAAGGATCATTTAAATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3305
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGAGTCTCACCTTTCCC
Suggested primer 2:TCACAACTTCGTGTCCCTCG