Insertion junction: CLIP2.009127_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009127
Chromosome:chromosome 4
Location:3850058
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g230046 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGTAGTGACCTGCGTGGTGAAACAAGGCCAGCAGTCGCCGCTGCTGAC
Internal bar code:CATGGTTTAAGTCAGGTTGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:492
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AACCAACACCGCGGTAGTAG
Suggested primer 2:CGCCTACCCCATGTATGCAT