Insertion junction: CLIP2.009130_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009130
Chromosome:chromosome 17
Location:3908696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727801 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGTGCGCACCAAGCCGGTGCCTTGACAGCCGCCCGCCAGCTGGTATC
Internal bar code:CCACTCTGCGCGTGTCCACTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2547
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAATAACGAGCGCACCA
Suggested primer 2:TGTGACACATACACCGGTGG