Insertion junction: CLIP2.009136_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009136
Chromosome:chromosome 1
Location:4951682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034350 (1 of 2) PTHR10641//PTHR10641:SF585 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB DNA-BINDING-LIKE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGGGAATTCGTAAGCCTTGATAGCAGCACGCTACAAAATTCAGGTGC
Internal bar code:CGAAGCGTCAGGGTATCCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1444
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGCGCACGGTTGTAAAA
Suggested primer 2:TCAAGATTTCGGCCCGTGAA