Insertion junction: CLIP2.009140_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009140
Chromosome:chromosome 9
Location:3247731
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394843 (1 of 1) PF07967 - C3HC zinc finger-like (zf-C3HC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGAGGGAAGGGCCGAGGAAGATGGGGGTAGCAAGAGAAGGCTTATGG
Internal bar code:GTCGACGGAAGACTAGCTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:342
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAGTAGAAGAGCGAGCA
Suggested primer 2:GACGAACGCAGGCTTTTGTT