Insertion junction: CLIP2.009142_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009142
Chromosome:chromosome 16
Location:5196329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684800 (1 of 1) PF00240//PF13855 - Ubiquitin family (ubiquitin) // Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGATGCTTGCAGACCGCACTGCGGCTACAGACTGCAAGAAAGGGACGG
Internal bar code:TGAAGTTAGAGGCGTGTTCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2455
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTTTATCCGCGAGCTGC
Suggested primer 2:CAACTTCACACTGCACCTGC