Insertion junction: CLIP2.009144_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009144
Chromosome:chromosome 3
Location:3844185
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170200 (1 of 2) PTHR10857:SF0 - PROTEIN GEM-4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTTGGGTGGCCAAGTGTCTTTCCCGTCCACTCCGGGGTGCCCTCACTT
Internal bar code:GCGCGTAGCCGTGGGCTCATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2435
LEAP-Seq percent confirming:99.2857
LEAP-Seq n confirming:139
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:140

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTTTGGTTCCAGGCTGG
Suggested primer 2:ATGGCGGTGAATGACGACTT