Insertion junction: CLIP2.009150_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009150
Chromosome:chromosome 15
Location:1453578
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre15.g641750 (1 of 3) PF05495 - CHY zinc finger (zf-CHY) intron
lncRNA_TCONS_00236644 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCTTCCCCTTCCCTACAACGCGCCTGCTGTACTACTGTTCCTGGGTA
Internal bar code:CCAAATGATGTAACTAGGAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:396
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTCACTCTGGTACGGCT
Suggested primer 2:TTCCTCTCGCTGCACTTGAG