Insertion junction: CLIP2.009150_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009150
Chromosome:chromosome 16
Location:7977672
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691552 NDA1 Type-II NADH dehydrogenase; (1 of 3) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCTGCATACCCCGCCTGCCCGCCCGCCCGCCTCCACACCTGCGCCAGC
Internal bar code:TGTATTCCGGGCGAGAGATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1267
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATGTGACACTGTCCTCA
Suggested primer 2:CATATTTGAGCACACGGGCG