Insertion junction: CLIP2.009156_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009156
Chromosome:chromosome 10
Location:4478067
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g450900 (1 of 6) PF09353 - Domain of unknown function (DUF1995) (DUF1995) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGCACCCACCGCCGGCGCAATTGCAATGCACCTAGCAGTCCGTTTGCA
Internal bar code:AACTTGATTATGTTAAATAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:303
LEAP-Seq percent confirming:26.7857
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAACCCCAGGATTTCACG
Suggested primer 2:GTAAGGGTTGGGGTGGATGG