Insertion junction: CLIP2.009157_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009157
Chromosome:chromosome 12
Location:4125210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517100 (1 of 2) 5.5.1.6 - Chalcone isomerase / Chalcone--flavanone isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATACCCTGCCCGCCCTGCACGACGCAGCCGGCGGCCCTGCGCAGTCGC
Internal bar code:ACCGTGGATTGTAAAGCAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1576
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGGCGGTGATGGAGTAC
Suggested primer 2:AACAAAATGCGACGTTGCGA