Insertion junction: CLIP2.009157_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009157
Chromosome:chromosome 12
Location:4125210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517100 (1 of 2) 5.5.1.6 - Chalcone isomerase / Chalcone--flavanone isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGTCAGCTGGTGGGGCCGTTTTACCACATGACGTACAGCGAGTGCTT
Internal bar code:ATACATAGGCAGAATGGAGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2068
LEAP-Seq percent confirming:95.9184
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:AACAAAATGCGACGTTGCGA
Suggested primer 2:CGTAGGCGGTGATGGAGTAC