Insertion junction: CLIP2.009163_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009163
Chromosome:chromosome 10
Location:551756
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g421350 MMP25 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGTCATCACGGCTCGCTCGAGTCTCCAGAACTCAGACATCGCATATC
Internal bar code:TGCTCAGGTAACCCGCGTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:672
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTGCATAGTCAGGGCTT
Suggested primer 2:CCAACTGGACTGCTGACCAT