Insertion junction: CLIP2.009163_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009163
Chromosome:chromosome 10
Location:551757
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g421350 MMP25 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCATAGCTTTAGGGCACGGAACACAGACGAAGCGGGTCTGCGGGTGTG
Internal bar code:TGCTCAGGTAACCCGCGTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1419
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACTGGACTGCTGACCAT
Suggested primer 2:GGTGTGCATAGTCAGGGCTT