Insertion junction: CLIP2.009166_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009166
Chromosome:chromosome 12
Location:2919458
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502550 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCACATCCGGTCCGCCTTCGCCTCCGCCGCCGGCAGCGCCGCCAGCCC
Internal bar code:AAATGCTCCAGTAAGCGGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1511
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTAAGCATTGTGATGGCG
Suggested primer 2:TGTCGGCGGTCTTGTACAAA