Insertion junction: CLIP2.009174_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009174
Chromosome:chromosome 16
Location:6677937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673250 NRR1 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED; Nitrogen Response Regulator 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGCGCTTGTAGAGGGTCGCGAAAGGGGAGTCGCAGTAAACAAATACC
Internal bar code:CGATCGTAGTTGTGTACGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:256
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTTGCCGTACTGCTGC
Suggested primer 2:AAGCTCAAACCACCCCCAAA