Insertion junction: CLIP2.009180_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009180
Chromosome:chromosome 6
Location:5780543
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288908 (1 of 30) PTHR24349//PTHR24349:SF79 - SERINE/THREONINE-PROTEIN KINASE // NITROGEN NETWORK KINASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCGCCGCATTTGCCGTGCGGCTGCGCACCTAGGGAGGAGGACACTGA
Internal bar code:GGTTTCAACTTAAGATTAGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:732
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGATACAGATGTACGCCGCC
Suggested primer 2:CGTAGTAGCTCTGTCCGCTG