Insertion junction: CLIP2.009187_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009187
Chromosome:chromosome 6
Location:8892948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g311950 ELG3 Exostosin-like glycosyltransferase 3; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAGCCACAGTTACAGCCCCGGTCACCATGCCCACTGTTTTGTGCTCAA
Internal bar code:GGTGATTATCGTGTATGTATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2537
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TACGCAGAACTTGGAGCTGG
Suggested primer 2:ATAATGCTGGCATGCGCAAG