Insertion junction: CLIP2.009187_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009187
Chromosome:chromosome 6
Location:8892953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g311950 ELG3 Exostosin-like glycosyltransferase 3; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTTGCAGTGCAGACAACATTCACACCTGAAGGCGCGTAGCAGGCTCC
Internal bar code:GGTGATTATCGTGTATGTATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1669
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:ATAATGCTGGCATGCGCAAG
Suggested primer 2:TACGCAGAACTTGGAGCTGG