Insertion junction: CLIP2.009196_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009196
Chromosome:chromosome 9
Location:2139802
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395800 (1 of 1) PF05907 - Eukaryotic protein of unknown function (DUF866) (DUF866) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGTATGCACGACTGCTCGCACCTTCTCGCAGTAGTCGCTCCACTCGT
Internal bar code:CGCCTGATAGTTAGGGCAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1711
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGTATCTGCAACCCCTT
Suggested primer 2:CGACAGTACCTGTGCAGTGT