Insertion junction: CLIP2.009197_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009197
Chromosome:chromosome 9
Location:4770633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402330 (1 of 1) IPR000104//IPR000719//IPR001245//IPR002290//IPR011009//IPR020635//IPR029016 - Antifreeze protein, type I // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGAAGGGCATTGTTGGCGCCAAACACCTGCACGACAAAGCAGGCGACC
Internal bar code:CGCAAAAGCTGAAGCTTAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3312
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGAATGTGGGTGTGTGCG
Suggested primer 2:GAGAGGAGGTGATCGGCATG