Insertion junction: CLIP2.009203_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009203
Chromosome:chromosome 4
Location:355540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217908 FAP79 Ankyrin Repeat Flagellar Associated Protein 79; (1 of 1) PTHR24133//PTHR24133:SF21//PTHR24198 - FAMILY NOT NAMED // ANKYRIN REPEAT-CONTAINING PROTEIN // ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCTCTCAAGCTAGACCTAGCGAATGGCGAGGGCCAGACAGCGCTGGC
Internal bar code:CAGGCCGTGGGCCGGTAAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4643
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCTACGTACGCACCCAG
Suggested primer 2:GGGCGGTTATCTTGGTGACA