Insertion junction: CLIP2.009206_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009206
Chromosome:chromosome 1
Location:6147233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043700 (1 of 1) PTHR13391//PTHR13391:SF0 - TUBULIN-RELATED PROTEIN // PROTEIN MISATO HOMOLOG 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCGCGCCCTGCTGAACTATTTGCGTCAACGCTCTCGGTCTTGGGTAT
Internal bar code:GTTTCTATTCCTTAAGCAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1134
LEAP-Seq percent confirming:59.375
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCACAAACTTCCAGCTG
Suggested primer 2:TCAGCGCTTGTCTCACATGT