Insertion junction: CLIP2.009214_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009214
Chromosome:chromosome 1
Location:515407
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003100 (1 of 1) IPR001623//IPR011011 - DnaJ domain // Zinc finger, FYVE/PHD-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGAACAAATAAATACCTATATACAGGTTTACTTCAAGCTTTTGCGTTG
Internal bar code:GTGACTAACTTCTGGTACGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2173
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCCCATGCTCATTGGGTG
Suggested primer 2:TTCCATGCAGTTCCCCATCC