Insertion junction: CLIP2.009216_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009216
Chromosome:chromosome 3
Location:2725793
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g800310 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCCCTCGCCTCCATACCCTCCGCCTCCCAGCCCGGCGCCTCCGTCAC
Internal bar code:CAGGGTTTGAGCATACGCATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:386
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GATATGGAGGAGCTGGCGAC
Suggested primer 2:GTCGCCAGCTCCTCCATATC