Insertion junction: CLIP2.009222_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009222
Chromosome:chromosome 16
Location:2156103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801897 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGCTAAATGTGGAAACCTTGCATGGTACACACACCACCTCCAGCCCGC
Internal bar code:GCGTTGCAAGAGCCAATGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3155
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTACAGACTGTGCGTCC
Suggested primer 2:AGGCTTCGCTTGCTCATTCT