Insertion junction: CLIP2.009224_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009224
Chromosome:chromosome 4
Location:1498279
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213800 (1 of 1) PTHR10825//PTHR10825:SF5 - RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT // E3 UBIQUITIN-PROTEIN LIGASE RING1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGTTTGCCACAGGCCTCCCGACCACAAGGATTGCCCTGTGTGCCGGA
Internal bar code:AAGACGGTGTAGGGTATTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:360
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAATGGGCAGTCAAGGGA
Suggested primer 2:CCGGTTTGCTTTGGTGAGTG