Insertion junction: CLIP2.009224_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009224
Chromosome:chromosome 4
Location:1498280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213800 (1 of 1) PTHR10825//PTHR10825:SF5 - RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT // E3 UBIQUITIN-PROTEIN LIGASE RING1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATCAGACAGATGGACGAGGTTGGTGTCGAGGAGTTGCAGCTGTGCTA
Internal bar code:TTAGAAGGCGCGTCCGTTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1728
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGTTTGCTTTGGTGAGTG
Suggested primer 2:GTCAATGGGCAGTCAAGGGA