Insertion junction: CLIP2.009226_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009226
Chromosome:chromosome 3
Location:5150379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800343 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTTTTCAAATTCGAAGCTGCTTGCTGGCGCCTCATCCGAGCTCTGGAT
Internal bar code:ACGGCATTTTATAGAGATGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4322
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:167
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:167

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGCTTCACTCTTCCCCAC
Suggested primer 2:TGCGGTGAGTTGTTTGCATG