Insertion junction: CLIP2.009228_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009228
Chromosome:chromosome 1
Location:5513809
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039200 FAP9,Rabl5,IFT22 (1 of 1) K07935 - Rab-like protein 5 (RABL5); Intraflagellar transport protein 22 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCACCTCCTGCGGAACAGCACGCGGATGGCCGCATGCCTGAGACCTAC
Internal bar code:GCGGCTGCGCGGGGGCCAAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1961
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCGAAAGACTTCCATGCA
Suggested primer 2:GCACAGGCTCCGTATCTACC