Insertion junction: CLIP2.009230_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009230
Chromosome:chromosome 12
Location:9416781
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541250 NAR1E Putative nitrite transporter; (1 of 7) PTHR30520//PTHR30520:SF0 - FORMATE TRANSPORTER-RELATED // FORMATE TRANSPORTER 1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCGAAAGCTGACGAACCATAGGGCCGTCGTCATGCCTCCGTCTCTAC
Internal bar code:ACAAACGGCACAACGGTACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:413
LEAP-Seq percent confirming:4.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGAATGGAGTATGCGGTA
Suggested primer 2:GGGTTTGCACCATTCCACAC