Insertion junction: CLIP2.009233_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009233
Chromosome:chromosome 5
Location:2787149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g240900 (1 of 1) IPR000001//IPR024079 - Kringle // Metallopeptidase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTGCGGCCTTTCGCGCGAGGCGTTTGCGGGGGTGGTGCCGCAGGTGG
Internal bar code:TAGGACGCGAGAGTTCTAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1032
LEAP-Seq percent confirming:27.7778
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAATCACGATGCCGCAAC
Suggested primer 2:CATCCCCCTGTCTCCCTACA