Insertion junction: CLIP2.009237_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009237
Chromosome:chromosome 14
Location:1882600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g620050 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCCAATCCATCGCCTCCTCCATCTCCTCCACATCCCCCTCTTCCATC
Internal bar code:TTTTCTGTACCTTCCCGATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2482
LEAP-Seq percent confirming:92.4242
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAGCATTTGACGTGGAG
Suggested primer 2:CTGGGCAGTTGGATGAAGGT