Insertion junction: CLIP2.009240_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009240
Chromosome:chromosome 6
Location:1779991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g263250 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCGGCGGCGGAGAGCAACAGCGCCGCGGAGGCCACTGGTGCCGTTAC
Internal bar code:ATAGGCAACTAGGGTGATTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1902
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAAGACAAGCAAGCCCGA
Suggested primer 2:TTCTCTTGCTGCTCCTGCTC