Insertion junction: CLIP2.009243_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009243
Chromosome:chromosome 3
Location:5118652
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180650 DEG7 (1 of 2) PTHR22939//PTHR22939:SF66 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PRO-APOPTOTIC SERINE PROTEASE NMA111; Deg protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACAGACGGGAGGTCCTTAATGCTGTTACGGACACGCGCGCGTACACTG
Internal bar code:CTCGTTGCGTAAGGGGGTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2698
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGACCATTCCCACTGCTT
Suggested primer 2:ATCATTGGCACTCCACACGT