Insertion junction: CLIP2.009244_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009244
Chromosome:chromosome 12
Location:2643860
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505750 RPB9 DNA-directed RNA polymerase II, 14.5 kDa polypeptide; (1 of 1) K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGCCCGCGCTTGCGAGACGCCATGGCCGCAGTGCGATGCCGCCGCGC
Internal bar code:TCGCCGAGCTGTACCGTCAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3082
LEAP-Seq percent confirming:84.8485
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGTGTGCAGGAAGTGTG
Suggested primer 2:GCATGGCGTAACCCGAAATC