Insertion junction: CLIP2.009250_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009250
Chromosome:chromosome 8
Location:4209050
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383950 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGCACTGCGCATGTGACTCTTTCGCGCTCGTTTGCCTCATCCTTG
Internal bar code:GAACAAGATACCGGTCGCGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1390
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AACGTCATGTTCGCTTGTGC
Suggested primer 2:CGAGGTTGGGGTTCACATCA