Insertion junction: CLIP2.009254_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009254
Chromosome:chromosome 13
Location:4525492
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603100 GT90-48,GT90F48 GT90 family protein 48; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCGTCTCGCGTGGGGCGCCTTGGGGTTGGTGAGGGGTGAGGGGCCC
Internal bar code:TTGGTGTTTGATGGTCGCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:875
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTACTGTTTGCCTTGTGG
Suggested primer 2:CGCTTGTTATCAGCATGCCC