Insertion junction: CLIP2.009261_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009261
Chromosome:chromosome 2
Location:4235902
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104400 (1 of 1) IPR000104//IPR005033 - Antifreeze protein, type I // YEATS intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTTGCATGCATGCAGCTACGGTGTTTGGTGCACGCACCACGCACCCG
Internal bar code:CGGAGAGTCGTAGGGTGGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2397
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTCCTTGTCAGGTGCGA
Suggested primer 2:CACCACACCACTACCACTCC