Insertion junction: CLIP2.009262_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009262
Chromosome:chromosome 1
Location:2404586
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013800 SXD1,TCY1 (1 of 1) PF14392 - Zinc knuckle (zf-CCHC_4); Zinc finger containing protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGGACGCTCGTGACGCTCTGGCGTCAGGGTCTGGGGAGGGCTATGA
Internal bar code:TAATTCCAACAGTAGCCGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:164
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGTGCACCAGAAAGACCG
Suggested primer 2:CGACGGAGACAAAACCTGGA