Insertion junction: CLIP2.009264_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009264
Chromosome:chromosome 12
Location:4120471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517050 FAP117 (1 of 7) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt); Flagellar Associated Protein 117 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCAAGGGGCTGCCCGGCAACACCCCATCGGCGCTGCAGTCGCCTGGC
Internal bar code:CAGTCAGGTTGGAGACCAGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2519
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCAAACTTCGTGCCAAG
Suggested primer 2:GTTAGCGGCTTTGGTTTGCA