Insertion junction: CLIP2.009266_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009266
Chromosome:chromosome 1
Location:2352020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013250 (1 of 2) IPR006357//IPR023214 - HAD-superfamily hydrolase, subfamily IIA // HAD-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGGCACAGACGCGGCCGCCGCGGGAGCCGCTGCCCCCTGTGCAGCTG
Internal bar code:TTTTTGTTTGAGGCACTCAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3014
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTTGAGGCAATTGCAACA
Suggested primer 2:ATAGCGAAGGATGCAGGACG