Insertion junction: CLIP2.009272_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009272
Chromosome:chromosome 17
Location:6858580
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g747397 (1 of 1) PTHR24362//PTHR24362:SF284 - SERINE/THREONINE-PROTEIN KINASE NEK // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCTTGCTTCATGTTGGGCATGCTGAAATGAGATCCTCCTCCGCGACGT
Internal bar code:GTGGCGTGGATTCTTGTTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:121
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCGAAAAAGCGGTGCAG
Suggested primer 2:ATGGGCATGAGTTGAGTGGG