Insertion junction: CLIP2.009278_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009278
Chromosome:chromosome 10
Location:3340302
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443400 (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGCCATGACCCATCCCCTGTGCCTGGGCACGGCGGCCAACACCCCTA
Internal bar code:TATGGTGTTGTTGCCTGGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1235
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAGTCGTTGACTGGGAG
Suggested primer 2:CCCATACAACCACCTGGCAT