Insertion junction: CLIP2.009280_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009280
Chromosome:chromosome 3
Location:734279
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145967 (1 of 2) K15437 - aminoacyl tRNA synthase complex-interacting multifunctional protein 1 (AIMP1, ARC1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTGGAGGGTCTGGGCTGCGGGGAAGGTCACCGCGGCCGGGTGGACCA
Internal bar code:ATTGGAGACGCGAAGGCACCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1702
LEAP-Seq percent confirming:56.5217
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCGCAAGTGAGACACGTA
Suggested primer 2:GACTCCCCAATCCCACATGG